Replacing antibiotics with common dietary elements

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Antibiotic use is causing antibiotic resistance, as more susceptible bacteria are killed but more resilient strains live on and multiply with abandon. Salk Institute researchers report that giving mice dietary iron supplements enabled them to survive a normally lethal bacterial infection and resulted in later generations of those bacterial being less virulent.

Non-antibiotic-based strategies like nutritional interventions can shift the relationship between the patient and pathogens away from antagonism and toward cooperation. Antibiotics and antimicrobials are one of the most important advances in medicine, if it is impossible to kill bacterial because of antibiotic resistance, promoting the health of the host can tame the behavior of the bacteria so that they don’t cause disease.

Empowering the cooperative defense system promotes health during host-microbe interactions. In 2017 researchers discovered that Salmonella bacteria can overcome a host’s natural aversion to food when sick, which results in more nutrients for the bacteria and a gentler infection for the host. And in 2015 they found a strain of E. colibacteria in mice that was capable of improving the animals’ tolerance to infections of the lungs and intestines by preventing wasting-a common and potentially deadly loss of muscle tissue that occurs in serious infections.

For the current work, researchers studied a naturally occurring gastrointestinal infection in mice caused by Citrobacter rodentium (CR), which leads to diarrhea, weight loss and, in extreme cases, death. (CR is related to pathogenic E. coli that are associated with human food recalls.) To elucidate novel mechanisms of the cooperative defense system, the Salk team used an innovative approach- lethal dose 50 (LD50), which is the dose of bacteria that kills 50 percent of the host population, while the other half of the population survives.

Using what’s known as a systems biology approach, they analyzed the gene activity that was induced in the infected healthy population compared to the infected sick population, as well as the uninfected healthy mice. From this analysis, they found that host iron metabolism was increased in the infected healthy population.

To test the importance of iron metabolism in promoting the cooperative defense system during infection, they conducted experiments with two years until graduating and is now a technician in the lab) gave a population of mice an LD100 dose of Citrobacter (which should kill 100 percent of the host population) and fed half the population a normal diet and the other half a diet supplemented with iron for only 14 days, after which they were returned to a normal diet.

By day 20, all of the infected mice in the no-iron group had succumbed to the infection. However, in the supplemental-iron group, 100 percent of the infected mice were alive and healthy, even at day 30. The researchers found that even if they dosed animals with 1000 times the LD100 dose of the pathogen, a two-week course of iron kept the animals alive and healthy.

Tissue analysis over the course of the experiment showed that both groups of infected mice had comparable levels of bacteria, yet the iron group appeared healthy while the no-iron group got sicker. Researcher used dietary iron as a tool to investigate the mechanism by which iron metabolism cured the  infection. They found that the short course of dietary iron caused an acute state of insulin resistance in the mice.

This reduced the amount of glucose (sugar) absorbed from the intestine, increasing the amount of sugar in the intestine for the pathogen to metabolize. Increased glucose metabolism prevented the pathogen from turning on its genes that cause disease. Additionally, the team found they could bypass iron and use glucose supplementation instead and achieve all the same results.

After a year, a later animals that were infected with Citrobacter and had received a single two-week course of dietary iron were alive and healthy, and surprisingly still colonized by the pathogen in their gastrointestinal tract. To determine if this was the case, the team sequenced the genomes of Citrobacter that were isolated from these animals and found that in the genes necessary for causing disease, the bacteria had accumulated mutations, rendering those genes non-functional. This implied that, by increasing the amount of glucose available to the pathogen, the team was preventing the bacteria from turning on genes that cause more symptoms of sickness in its host. And, over time, by having its nutritional needs met, the pathogen was becoming less antagonistic.

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